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GenBank Identifier | RefSeq Acc. | Name |
9625366 | NC_001331.1 | Pseudomonas phage Pf1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA![]() |
Match to own genomic region# | Target prediction with RNAhybrid |
1298 | + | 227 | 85 | 19.5 | -20 | NP_039600 | 5' arm 3' arm | ||
1308 | + | 5818 | 86 | 22.5 | -20.7 | NP_039608 | 5' arm 3' arm | ||
1306 | + | 5231 | 89 | 21 | -23.4 | NP_039607 | 5' arm 3' arm | ||
1307 | + | 5375 | 88 | 19 | -26.6 | NP_039607 | 5' arm 3' arm | ||
1311 | - | 246 | 88 | 19 | -22 | NP_039600 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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