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| GenBank Identifier | RefSeq Acc. | Name |
| 9630638 | NC_001916.1 | Infectious pancreatic necrosis virus segment B |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 7461 | - | 1452 | 75 | 22 | -33.8 | NP_047197 | 5' arm 3' arm | ||
| 7451 | - | 103 | 89 | 19 | -28 | 5' arm 3' arm | |||
| 7460 | - | 1010 | 88 | 25.5 | -26.4 | NP_047197 | 5' arm 3' arm | ||
| 7452 | - | 1096 | 87 | 22 | -26 | NP_047196 | 5' arm 3' arm | ||
| 7455 | - | 2305 | 90 | 19 | -25.7 | NP_047196 | 5' arm 3' arm | ||
| 7456 | - | 2637 | 88 | 24.5 | -25.3 | NP_047196 | 5' arm 3' arm | ||
| 7449 | + | 242 | 87 | 19 | -24.6 | NP_047196 | 5' arm 3' arm | ||
| 7450 | + | 909 | 87 | 19 | -24.6 | NP_047196 | 5' arm 3' arm | ||
| 7459 | - | 618 | 90 | 21.5 | -23 | NP_047197 | 5' arm 3' arm | ||
| 7457 | + | 923 | 88 | 22 | -21.5 | NP_047197 | 5' arm 3' arm | ||
| 7462 | - | 1755 | 89 | 21.5 | -20.8 | NP_047197 | 5' arm 3' arm | ||
| 7458 | + | 1711 | 89 | 19 | -20.4 | NP_047197 | 5' arm 3' arm | ||
| 7463 | - | 2253 | 86 | 23 | -20.4 | NP_047197 | 5' arm 3' arm | ||
| 7454 | - | 2033 | 85 | 19.5 | -19.7 | NP_047196 | 5' arm 3' arm | ||
| 7453 | - | 1565 | 87 | 19 | -19.4 | NP_047196 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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