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GenBank Identifier | RefSeq Acc. | Name |
9629246 | NC_001786.1 | Barmah Forest virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
5078 | + | 5331 | 90 | 21.5 | -19.8 | NP_054023 | 5' arm 3' arm | ||
5079 | + | 9949 | 86 | 19.5 | -23.4 | NP_054024 | 5' arm 3' arm | ||
5080 | + | 10565 | 89 | 21 | -23.1 | NP_054024 | 5' arm 3' arm | ||
5081 | - | 1596 | 89 | 20.5 | -25.9 | NP_054023 | 5' arm 3' arm | ||
5082 | - | 4439 | 90 | 24 | -23.7 | NP_054023 | 5' arm 3' arm | ||
5083 | - | 5796 | 88 | 22 | -23.3 | NP_597797 | 5' arm 3' arm | ||
5084 | - | 7479 | 90 | 22 | -21.5 | NP_054024 | 5' arm 3' arm | ||
5085 | - | 8638 | 90 | 20 | -24.2 | NP_054024 | 5' arm 3' arm | ||
5086 | - | 9421 | 89 | 20.5 | -21.7 | NP_054024 | 5' arm 3' arm | ||
5087 | - | 10211 | 86 | 19 | -24.2 | 5' arm 3' arm | |||
5088 | - | 10653 | 89 | 22 | -22.2 | NP_054024 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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