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| GenBank Identifier | RefSeq Acc. | Name |
| 9627007 | NC_001512.1 | O'nyong-nyong virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 3218 | + | 8812 | 85 | 21 | -19.5 | NP_041255 | 5' arm 3' arm | ||
| 3219 | + | 10487 | 90 | 26 | -22.4 | NP_041255 | 5' arm 3' arm | ||
| 3220 | - | 839 | 90 | 20.5 | -27.7 | NP_041254 | 5' arm 3' arm | ||
| 3221 | - | 2451 | 87 | 19 | -22.1 | NP_041254 | 5' arm 3' arm | ||
| 3222 | - | 2951 | 81 | 23.5 | -30.6 | NP_041254 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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