miRNA display CGI


Results 1 - 15 of 15 are showing below:
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GenBank Identifier RefSeq Acc. Name
16767845 NC_003215.1 Semliki forest virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11731 + 534 90 22.5 -23.1 NP_463457 5' arm      3' arm
11732 + 2771 88 19 -19.9 NP_463457 5' arm      3' arm
11733 + 3073 88 19 -26.5 NP_463457 5' arm      3' arm
11734 + 3667 89 21.5 -23.7 NP_463457 5' arm      3' arm
11735 + 5781 87 19 -26.8 NP_463457 5' arm      3' arm
11736 + 7005 90 20.5 -27.92 NP_463457 5' arm      3' arm
11737 + 10300 90 19 -20.6 NP_463458 5' arm      3' arm
11738 + 11096 89 21 -23.9 NP_463458 5' arm      3' arm
11739 - 403 90 24.5 -20.5 NP_463457 5' arm      3' arm
11740 - 2809 90 19.5 -24.6 NP_463457 5' arm      3' arm
11741 - 4468 89 22 -29.7 NP_463457 5' arm      3' arm
11742 - 5389 88 21.5 -29.7 NP_463457 5' arm      3' arm
11743 - 6102 89 22 -21.4 NP_463457 5' arm      3' arm
11744 - 8489 86 21.5 -19.6 NP_463458 5' arm      3' arm
11745 - 10578 85 22.5 -21.9 NP_463458 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.