miRNA display CGI


Results 1 - 11 of 11 are showing below:
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GenBank Identifier RefSeq Acc. Name
9790313 NC_001547.1 Sindbis virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3325 + 724 90 22 -22.7 NP_062888 5' arm      3' arm
3326 + 848 88 20 -27.5 NP_062889 5' arm      3' arm
3327 + 5498 89 23 -23.9 NP_062888 5' arm      3' arm
3328 - 677 90 21 -23.8 NP_062888 5' arm      3' arm
3329 - 1130 90 19.5 -24.3 NP_062889 5' arm      3' arm
3330 - 2205 90 20.5 -20 NP_062888 5' arm      3' arm
3331 - 3396 87 23.5 -19.7 NP_062888 5' arm      3' arm
3332 - 5157 89 21 -20.7 NP_062889 5' arm      3' arm
3333 - 5586 89 20 -21.7 NP_062889 5' arm      3' arm
3334 - 10164 90 19 -23.7 NP_062890 5' arm      3' arm
3335 - 11569 89 25 -19.6 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.