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GenBank Identifier | RefSeq Acc. | Name |
9626526 | NC_001449.1 | Venezuelan equine encephalitis virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
2485 | + | 1021 | 89 | 19.5 | -21.1 | NP_040822 | 5' arm 3' arm | ||
2486 | + | 6837 | 90 | 21.5 | -20.1 | NP_040822 | 5' arm 3' arm | ||
2487 | + | 8148 | 85 | 20.5 | -23 | NP_040824 | 5' arm 3' arm | ||
2488 | - | 219 | 89 | 20.5 | -21.5 | NP_040823 | 5' arm 3' arm | ||
2489 | - | 2453 | 87 | 23.5 | -19.4 | NP_040822 | 5' arm 3' arm | ||
2490 | - | 5512 | 89 | 24 | -22 | NP_040822 | 5' arm 3' arm | ||
2491 | - | 7759 | 89 | 20 | -29.6 | NP_040824 | 5' arm 3' arm | ||
2492 | - | 10060 | 90 | 19.5 | -22.2 | NP_040824 | 5' arm 3' arm | ||
2493 | - | 10398 | 89 | 20.5 | -23.1 | NP_040824 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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