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| GenBank Identifier | RefSeq Acc. | Name |
| 9633622 | NC_000943.1 | Murray Valley encephalitis virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 1136 | + | 177 | 89 | 22.5 | -23.3 | NP_051124 | 5' arm 3' arm | ||
| 1137 | + | 3592 | 90 | 20.5 | -21.8 | NP_051124 | 5' arm 3' arm | ||
| 1138 | + | 6475 | 90 | 19 | -20.3 | NP_051124 | 5' arm 3' arm | ||
| 1139 | + | 10931 | 84 | 19.5 | -29 | 5' arm 3' arm | |||
| 1140 | - | 10660 | 90 | 24 | -30 | 5' arm 3' arm | |||
| 1141 | - | 11014 | 84 | 24 | -26.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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