miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6004	+	321	89	20	-20.23	NP_044677		5' arm      3' arm
6005	+	871	87	22.5	-23.2	NP_044677		5' arm      3' arm
6006	+	1035	86	20	-26.6	NP_044677		5' arm      3' arm
6007	+	5251	89	21	-19.9	NP_044677		5' arm      3' arm
6008	+	5586	90	19.5	-26.3	NP_044677		5' arm      3' arm
6009	+	6439	89	24.5	-28.1	NP_044677		5' arm      3' arm
6010	+	6614	89	20.5	-19.4	NP_044677		5' arm      3' arm
6011	+	6736	87	19	-19.6	NP_044677		5' arm      3' arm
6012	+	6875	90	20.5	-25.7	NP_044677		5' arm      3' arm
6013	+	7233	90	20	-21.3	NP_044677		5' arm      3' arm
6014	+	7428	90	24	-20.5	NP_044677		5' arm      3' arm
6015	+	7564	89	22	-29.2	NP_044677		5' arm      3' arm
6016	+	8369	90	19	-28.4	NP_044677		5' arm      3' arm
6017	+	9116	87	20.5	-22.6	NP_044677		5' arm      3' arm
6018	+	9725	90	19	-24	NP_044677		5' arm      3' arm
6019	-	223	86	20	-28.1	NP_044677		5' arm      3' arm
6020	-	3304	89	20.5	-21.4	NP_044677		5' arm      3' arm
6021	-	10117	90	21.5	-21.3	NP_044677		5' arm      3' arm
6022	-	10493	86	21.5	-28.56			5' arm      3' arm
6023	-	10632	90	22.5	-23.4			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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