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GenBank Identifier | RefSeq Acc. | Name |
9627244 | NC_002031.1 | Yellow fever virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
8275 | + | 1235 | 90 | 20.5 | -22.7 | NP_041726 | 5' arm 3' arm | ||
8276 | + | 1622 | 87 | 21.5 | -27.7 | NP_041726 | 5' arm 3' arm | ||
8277 | + | 2036 | 84 | 25 | -19.6 | NP_041726 | 5' arm 3' arm | ||
8278 | + | 3795 | 90 | 20.5 | -23.4 | NP_041726 | 5' arm 3' arm | ||
8279 | + | 4541 | 90 | 21.5 | -24.2 | NP_041726 | 5' arm 3' arm | ||
8280 | + | 8132 | 88 | 21 | -31.3 | NP_041726 | 5' arm 3' arm | ||
8281 | + | 8343 | 90 | 19.5 | -20.6 | NP_041726 | 5' arm 3' arm | ||
8282 | + | 9080 | 80 | 20 | -23.4 | NP_041726 | 5' arm 3' arm | ||
8283 | + | 10776 | 87 | 23.5 | -27.3 | 5' arm 3' arm | |||
8284 | - | 10862 | 87 | 22 | -23.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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