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| GenBank Identifier | RefSeq Acc. | Name |
| 12657941 | NC_002657.1 | Classical swine fever virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 10194 | + | 2679 | 90 | 21.5 | -20.4 | NP_075354 | 5' arm 3' arm | ||
| 10195 | + | 2795 | 82 | 19 | -27.4 | NP_075354 | 5' arm 3' arm | ||
| 10196 | + | 9243 | 84 | 19.5 | -21.6 | NP_075354 | 5' arm 3' arm | ||
| 10197 | - | 184 | 89 | 19.5 | -23.4 | 5' arm 3' arm | |||
| 10198 | - | 315 | 84 | 19.5 | -22.5 | 5' arm 3' arm | |||
| 10199 | - | 6245 | 89 | 22.5 | -19.9 | NP_075354 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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