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GenBank Identifier | RefSeq Acc. | Name |
15081544 | NC_003045.1 | Bovine coronavirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
11236 | + | 579 | 88 | 25 | -25.7 | NP_150073 | 5' arm 3' arm | ||
11237 | + | 4076 | 89 | 25 | -21 | NP_150074 | 5' arm 3' arm | ||
11238 | + | 6043 | 87 | 25.5 | -26.1 | NP_150074 | 5' arm 3' arm | ||
11239 | + | 6438 | 88 | 26 | -28.7 | NP_150074 | 5' arm 3' arm | ||
11240 | + | 21834 | 90 | 20 | -24.1 | NP_150075 | 5' arm 3' arm | ||
11241 | + | 26490 | 88 | 20.5 | -21.7 | NP_150077 | 5' arm 3' arm | ||
11242 | + | 29279 | 89 | 19 | -21.5 | NP_150082 | 5' arm 3' arm | ||
11243 | - | 22123 | 76 | 20 | -23.8 | NP_150075 | 5' arm 3' arm | ||
11244 | - | 29720 | 87 | 20.5 | -25.2 | NP_150084 | 5' arm 3' arm | ||
11245 | - | 30080 | 88 | 22 | -24.2 | NP_150083 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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