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GenBank Identifier | RefSeq Acc. | Name |
9634052 | NC_001278.1 | Diaporthe ambigua RNA virus 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
1243 | + | 395 | 88 | 20 | -21.3 | 5' arm 3' arm | |||
1244 | + | 764 | 89 | 24.5 | -29.9 | NP_037580 | 5' arm 3' arm | ||
1245 | + | 1919 | 90 | 27.5 | -27.7 | NP_037580 | 5' arm 3' arm | ||
1246 | + | 2248 | 90 | 21.5 | -21.2 | NP_037581 | 5' arm 3' arm | ||
1247 | + | 2706 | 90 | 21 | -25.1 | NP_037581 | 5' arm 3' arm | ||
1248 | + | 2840 | 89 | 28 | -21.9 | NP_037581 | 5' arm 3' arm | ||
1249 | + | 3429 | 90 | 22 | -24.4 | NP_037581 | 5' arm 3' arm | ||
1250 | + | 3804 | 89 | 20 | -21.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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