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| GenBank Identifier | RefSeq Acc. | Name |
| 48843534 | NC_005905.1 | Neodiprion sertifer nucleopolyhedrovirus |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28314 | - | 11298 | 90 | 27 | -22.8 | 5' arm 3' arm | |||
| 28318 | - | 11818 | 90 | 27 | -22.8 | 5' arm 3' arm | |||
| 28317 | - | 11688 | 90 | 27 | -22.8 | 5' arm 3' arm | |||
| 28305 | + | 20038 | 89 | 25.5 | -21.9 | 5' arm 3' arm | |||
| 28306 | + | 27325 | 87 | 24 | -21.7 | 5' arm 3' arm | |||
| 28312 | - | 8716 | 89 | 25.5 | -21.4 | 5' arm 3' arm | |||
| 28300 | + | 5531 | 90 | 23.5 | -21.1 | YP_025114 | 5' arm 3' arm | ||
| 28311 | + | 49378 | 88 | 25.5 | -20.4 | 5' arm 3' arm | |||
| 28323 | - | 17803 | 89 | 28.5 | -20.2 | 5' arm 3' arm | |||
| 28303 | + | 19800 | 89 | 23.5 | -20.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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