miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9627219 NC_001552.1 Sendai virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3349 + 1874 89 19.5 -22 NP_056872 5' arm      3' arm
3350 + 5778 87 19.5 -24.2 5' arm      3' arm
3351 + 13784 89 20.5 -20.9 NP_056879 5' arm      3' arm
3352 - 1837 89 21 -21.4 5' arm      3' arm
3353 - 2040 90 21.5 -21.8 NP_056875 5' arm      3' arm
3354 - 2772 88 22 -22.4 NP_056873 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.