miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
37651479 NC_005136.1 Oat necrotic mottle virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22851 + 317 88 22 -24.8 NP_932608 5' arm      3' arm
22853 + 9255 89 30 -22.6 5' arm      3' arm
22852 + 6232 85 19 -20.5 NP_932608 5' arm      3' arm
22854 - 94 90 23.5 -19.7 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.