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GenBank Identifier | RefSeq Acc. | Name |
9632550 | NC_000855.1 | Viral hemorrhagic septicemia virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
792 | + | 7666 | 85 | 19 | -20.1 | NP_049550 | 5' arm 3' arm | ||
790 | + | 792 | 90 | 19 | -20.4 | NP_049545 | 5' arm 3' arm | ||
796 | - | 6270 | 89 | 19.5 | -20.8 | NP_049550 | 5' arm 3' arm | ||
797 | - | 10349 | 90 | 19.5 | -22.4 | NP_049550 | 5' arm 3' arm | ||
791 | + | 1087 | 90 | 19 | -22.6 | NP_049545 | 5' arm 3' arm | ||
789 | + | 449 | 85 | 19.5 | -22.7 | NP_049545 | 5' arm 3' arm | ||
795 | - | 786 | 88 | 21 | -24.6 | NP_049545 | 5' arm 3' arm | ||
794 | + | 10686 | 87 | 22 | -24.7 | NP_049550 | 5' arm 3' arm | ||
793 | + | 10001 | 85 | 19 | -28.8 | NP_049550 | 5' arm 3' arm | ||
798 | - | 10773 | 89 | 19.5 | -29.9 | NP_049550 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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