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GenBank Identifier | RefSeq Acc. | Name |
9845468 | NC_002513.1 | Ovine adenovirus A |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
9389 | + | 4583 | 89 | 21.5 | -22.4 | NP_064286 | 5' arm 3' arm | ||
9390 | + | 11208 | 88 | 21.5 | -24.3 | NP_597921 | 5' arm 3' arm | ||
9391 | + | 13825 | 90 | 21.5 | -25.92 | 5' arm 3' arm | |||
9392 | + | 18505 | 87 | 19.5 | -20.3 | NP_597925 | 5' arm 3' arm | ||
9393 | + | 23492 | 77 | 20 | -21.5 | NP_597927 | 5' arm 3' arm | ||
9394 | - | 9638 | 89 | 20.5 | -21.8 | 5' arm 3' arm | |||
9395 | - | 9897 | 85 | 19 | -21.2 | 5' arm 3' arm | |||
9396 | - | 14096 | 90 | 20 | -26.3 | 5' arm 3' arm | |||
9397 | - | 14225 | 89 | 20 | -26.2 | 5' arm 3' arm | |||
9398 | - | 15034 | 88 | 19.5 | -23.6 | NP_597923 | 5' arm 3' arm | ||
9399 | - | 15397 | 90 | 23 | -21.7 | NP_597923 | 5' arm 3' arm | ||
9400 | - | 24085 | 89 | 21 | -23.1 | 5' arm 3' arm | |||
9401 | - | 24323 | 90 | 23 | -20.1 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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