miRNA display CGI


Results 1 - 20 of 258 are showing below:
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GenBank Identifier RefSeq Acc. Name
22091104 NC_004084.1 Virus PhiCh1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16249 + 409 89 22 -24.2 NP_665919 5' arm      3' arm
16250 + 526 90 19 -22 NP_665919 5' arm      3' arm
16251 + 1178 89 20.5 -31.3 NP_665920 5' arm      3' arm
16252 + 1571 90 21 -21.5 NP_665920 5' arm      3' arm
16253 + 1671 89 19 -22.1 NP_665920 5' arm      3' arm
16254 + 2464 86 19.5 -25.8 5' arm      3' arm
16255 + 2631 90 20 -19.7 NP_665921 5' arm      3' arm
16256 + 2816 90 19 -23.2 NP_665922 5' arm      3' arm
16257 + 3028 87 21.5 -23.9 NP_665923 5' arm      3' arm
16258 + 3323 85 19 -21.9 5' arm      3' arm
16259 + 4181 85 19 -27.9 NP_665924 5' arm      3' arm
16260 + 5507 87 22 -23 NP_665925 5' arm      3' arm
16261 + 5902 76 20 -23.8 NP_665926 5' arm      3' arm
16262 + 6506 90 19.5 -22 NP_665926 5' arm      3' arm
16263 + 6741 90 19.5 -20.5 NP_665927 5' arm      3' arm
16264 + 7841 90 19 -24.2 NP_665929 5' arm      3' arm
16265 + 8814 89 21.5 -23.7 NP_665930 5' arm      3' arm
16266 + 9169 90 25 -25.8 NP_665931 5' arm      3' arm
16267 + 9362 89 21 -21.8 NP_665931 5' arm      3' arm
16268 + 9641 86 22.5 -29.2 NP_665931 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.