miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16249	+	409	89	22	-24.2	NP_665919		5' arm      3' arm
16250	+	526	90	19	-22	NP_665919		5' arm      3' arm
16251	+	1178	89	20.5	-31.3	NP_665920		5' arm      3' arm
16252	+	1571	90	21	-21.5	NP_665920		5' arm      3' arm
16253	+	1671	89	19	-22.1	NP_665920		5' arm      3' arm
16254	+	2464	86	19.5	-25.8			5' arm      3' arm
16255	+	2631	90	20	-19.7	NP_665921		5' arm      3' arm
16256	+	2816	90	19	-23.2	NP_665922		5' arm      3' arm
16257	+	3028	87	21.5	-23.9	NP_665923		5' arm      3' arm
16258	+	3323	85	19	-21.9			5' arm      3' arm
16259	+	4181	85	19	-27.9	NP_665924		5' arm      3' arm
16260	+	5507	87	22	-23	NP_665925		5' arm      3' arm
16261	+	5902	76	20	-23.8	NP_665926		5' arm      3' arm
16262	+	6506	90	19.5	-22	NP_665926		5' arm      3' arm
16263	+	6741	90	19.5	-20.5	NP_665927		5' arm      3' arm
16264	+	7841	90	19	-24.2	NP_665929		5' arm      3' arm
16265	+	8814	89	21.5	-23.7	NP_665930		5' arm      3' arm
16266	+	9169	90	25	-25.8	NP_665931		5' arm      3' arm
16267	+	9362	89	21	-21.8	NP_665931		5' arm      3' arm
16268	+	9641	86	22.5	-29.2	NP_665931		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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