miRNA display CGI


Results 1 - 20 of 23 are showing below:
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GenBank Identifier RefSeq Acc. Name
66391451 NC_007023.1 Enterobacteria phage RB43

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
32294 - 149656 83 23 -20.2 YP_239225 5' arm      3' arm
32293 - 142194 89 19.5 -25.2 YP_239210 5' arm      3' arm
32292 - 134901 81 21 -19.8 YP_239202 5' arm      3' arm
32291 - 104928 84 19 -19.6 YP_239177 5' arm      3' arm
32290 - 97088 90 20 -19.6 5' arm      3' arm
32289 - 83881 87 23.5 -24.2 YP_239123 5' arm      3' arm
32288 - 78971 89 22 -19.5 YP_239112 5' arm      3' arm
32287 - 70459 84 19 -23 YP_239095 5' arm      3' arm
32286 - 67387 90 21 -20.7 5' arm      3' arm
32285 - 2019 89 19 -21.1 YP_238977 5' arm      3' arm
32284 + 176058 88 19.5 -25.2 YP_239258 5' arm      3' arm
32283 + 169614 87 22 -19.7 YP_239255 5' arm      3' arm
32282 + 152987 89 20 -20.2 YP_239232 5' arm      3' arm
32281 + 151135 83 24.5 -21.7 YP_239230 5' arm      3' arm
32280 + 146957 87 20.5 -21.8 YP_239219 5' arm      3' arm
32279 + 136927 90 20.5 -26.4 5' arm      3' arm
32278 + 109637 90 19 -24.8 YP_239181 5' arm      3' arm
32277 + 90363 88 23.5 -24 YP_239137 5' arm      3' arm
32276 + 56354 86 19.5 -21.4 YP_239071 5' arm      3' arm
32275 + 44669 87 24 -29 YP_239042 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.