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| GenBank Identifier | RefSeq Acc. | Name |
| 9627204 | NC_001549.1 | Simian immunodeficiency virus |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 3336 | + | 478 | 89 | 21.5 | -23.4 | 5' arm 3' arm | |||
| 3337 | + | 7790 | 89 | 21.5 | -23.4 | NP_054372 | 5' arm 3' arm | ||
| 3338 | + | 9418 | 82 | 20 | -23.4 | 5' arm 3' arm | |||
| 3341 | - | 6051 | 89 | 20 | -21.2 | NP_054371 | 5' arm 3' arm | ||
| 3339 | - | 702 | 86 | 20.5 | -23.3 | 5' arm 3' arm | |||
| 3340 | - | 2329 | 89 | 20 | -20.5 | NP_054369 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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