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GenBank Identifier | RefSeq Acc. | Name |
9630707 | NC_001940.1 | Feline leukemia virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
7517 | + | 661 | 82 | 19.5 | -20.1 | NP_047255 | 5' arm 3' arm | ||
7521 | - | 3769 | 90 | 22 | -21.4 | NP_047255 | 5' arm 3' arm | ||
7526 | - | 6712 | 86 | 21.5 | -23.6 | NP_047256 | 5' arm 3' arm | ||
7525 | - | 6427 | 89 | 21.5 | -25.4 | NP_047256 | 5' arm 3' arm | ||
7528 | - | 7189 | 87 | 21 | -22.7 | NP_047256 | 5' arm 3' arm | ||
7523 | - | 4458 | 90 | 20.5 | -20.8 | NP_047255 | 5' arm 3' arm | ||
7522 | - | 3879 | 86 | 20.5 | -23.2 | NP_047255 | 5' arm 3' arm | ||
7529 | - | 8367 | 88 | 19 | -25.1 | 5' arm 3' arm | |||
7527 | - | 6829 | 88 | 19 | -21.3 | NP_047256 | 5' arm 3' arm | ||
7524 | - | 5728 | 90 | 19 | -20.7 | NP_047255 | 5' arm 3' arm | ||
7520 | - | 2459 | 82 | 26 | -21.6 | NP_047255 | 5' arm 3' arm | ||
7519 | - | 1009 | 88 | 23 | -22.8 | NP_047255 | 5' arm 3' arm | ||
7518 | - | 402 | 88 | 19 | -25.1 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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