miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
9626955 NC_001500.1 Spleen focus-forming virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3160 + 454 87 22 -24.5 5' arm      3' arm
3161 + 4879 89 20.5 -27.2 NP_041218 5' arm      3' arm
3162 + 5321 85 21 -28.7 NP_041218 5' arm      3' arm
3163 - 213 90 20 -26.52 5' arm      3' arm
3164 - 1924 88 19 -24.1 5' arm      3' arm
3165 - 2605 89 21.5 -22.7 5' arm      3' arm
3166 - 3647 87 22 -28.8 5' arm      3' arm
3167 - 4230 87 21.5 -22 5' arm      3' arm
3168 - 4389 89 24 -23.9 5' arm      3' arm
3169 - 5239 86 19 -21.5 NP_041218 5' arm      3' arm
3170 - 5362 90 24.5 -19.7 NP_041218 5' arm      3' arm
3171 - 5995 90 20 -26.52 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.