miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
9626984 NC_001506.1 Murine osteosarcoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3215 - 3737 90 24.5 -22.5 5' arm      3' arm
3213 - 3142 90 24.5 -22.5 5' arm      3' arm
3211 - 1146 87 21.5 -26.4 NP_056890 5' arm      3' arm
3212 - 1855 88 20.5 -27.1 NP_056890 5' arm      3' arm
3214 - 3413 87 19.5 -23.91 5' arm      3' arm
3210 + 3327 87 23 -24.3 5' arm      3' arm
3208 + 480 82 22 -20.3 5' arm      3' arm
3207 + 81 89 21.5 -27.6 5' arm      3' arm
3209 + 2604 89 20 -21.2 NP_598374 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.