miRNA display CGI


Results 1 - 13 of 13 are showing below:
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GenBank Identifier RefSeq Acc. Name
9630311 NC_001885.1 Gibbon ape leukemia virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7069 + 1703 87 20.5 -20.8 NP_056789 5' arm      3' arm
7068 + 726 90 19 -27.7 NP_056789 5' arm      3' arm
7078 - 3694 88 24.5 -28.1 NP_056790 5' arm      3' arm
7080 - 8084 89 20.5 -26.1 5' arm      3' arm
7079 - 5908 88 20.5 -19.7 NP_056791 5' arm      3' arm
7076 - 2706 90 21.5 -25 NP_056790 5' arm      3' arm
7074 - 1790 89 21 -20.8 NP_056789 5' arm      3' arm
7072 - 922 89 21 -32.3 NP_056789 5' arm      3' arm
7073 - 1221 87 20 -26.8 NP_056789 5' arm      3' arm
7071 - 483 83 20 -29.5 5' arm      3' arm
7077 - 2825 81 19 -23.9 NP_056790 5' arm      3' arm
7075 - 2237 88 19 -23.4 5' arm      3' arm
7070 - 200 80 19 -24 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.