miRNA display CGI


Results 1 - 13 of 13 are showing below:
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GenBank Identifier RefSeq Acc. Name
9626196 NC_001407.1 Rous sarcoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2288 - 2118 85 19.5 -26.4 NP_056886 5' arm      3' arm
2289 - 2577 89 20 -22.3 NP_056886 5' arm      3' arm
2290 - 4023 89 21 -27.1 NP_056886 5' arm      3' arm
2291 - 9006 89 22.5 -20.76 5' arm      3' arm
2286 + 8424 90 19 -21.6 NP_056888 5' arm      3' arm
2285 + 6474 90 20.5 -21.1 NP_056885 5' arm      3' arm
2287 + 8918 90 31.5 -31.8 5' arm      3' arm
2282 + 2934 86 19 -25.2 NP_056886 5' arm      3' arm
2284 + 3630 87 19.5 -24.2 NP_056886 5' arm      3' arm
2280 + 874 90 20 -26 NP_056886 5' arm      3' arm
2279 + 48 90 21.5 -19.7 5' arm      3' arm
2283 + 3236 90 22.5 -28.3 NP_056886 5' arm      3' arm
2281 + 1000 90 25.5 -26.9 NP_056887 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.