miRNA display CGI


Results 1 - 11 of 11 are showing below:
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GenBank Identifier RefSeq Acc. Name
9626453 NC_001436.1 Human T-lymphotropic virus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2454 + 106 86 19.5 -21.4 5' arm      3' arm
2455 + 6687 85 19 -21 5' arm      3' arm
2456 + 8385 86 19.5 -21.4 5' arm      3' arm
2457 - 1290 88 23 -24.5 NP_057861 5' arm      3' arm
2458 - 1784 89 24.5 -31.01 5' arm      3' arm
2459 - 2318 89 21.5 -26.4 NP_057861 5' arm      3' arm
2460 - 4098 88 25.5 -21.2 NP_057860 5' arm      3' arm
2461 - 5039 85 19.5 -24.1 NP_057865 5' arm      3' arm
2462 - 6774 88 19.5 -21.4 5' arm      3' arm
2463 - 7692 90 19 -21.2 NP_057864 5' arm      3' arm
2464 - 8116 90 23.5 -31.1 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.