miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9626152 NC_001402.1 Avian carcinoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
2200 + 1036 86 23.5 -34.4 NP_040504 5' arm      3' arm
2201 + 1944 87 21 -24.8 5' arm      3' arm
2204 - 1121 86 21.5 -30 NP_040504 5' arm      3' arm
2203 - 910 90 20 -19.7 NP_040504 5' arm      3' arm
2202 - 725 85 19 -24 NP_040504 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.