miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
9627014 NC_001514.1 Woolly monkey sarcoma virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
3227 + 6070 87 19 -20.1 NP_041261 5' arm      3' arm
3232 - 2152 90 19.5 -20.4 NP_041259 5' arm      3' arm
3237 - 8471 90 22 -20.6 5' arm      3' arm
3229 - 142 90 22 -20.6 5' arm      3' arm
3236 - 6393 90 20.5 -21.4 NP_041262 5' arm      3' arm
3233 - 2494 89 19 -21.8 NP_041259 5' arm      3' arm
3230 - 596 89 19 -22.6 5' arm      3' arm
3231 - 1770 90 22 -22.67 NP_041259 5' arm      3' arm
3234 - 2835 90 23 -23.1 NP_041259 5' arm      3' arm
3226 + 408 89 23.5 -23.4 5' arm      3' arm
3235 - 3595 90 22 -24.64 NP_041260 5' arm      3' arm
3228 + 8405 85 19.5 -24.7 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.