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| GenBank Identifier | RefSeq Acc. | Name |
| 9626971 | NC_001504.1 | Melon necrotic spot virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 3199 | + | 894 | 88 | 20.5 | -22.41 | NP_041226 | 5' arm 3' arm | ||
| 3200 | + | 1180 | 88 | 24.5 | -25.7 | NP_041226 | 5' arm 3' arm | ||
| 3201 | + | 3360 | 89 | 20.5 | -23.2 | NP_041231 | 5' arm 3' arm | ||
| 3202 | + | 3676 | 90 | 26.5 | -20.5 | NP_041231 | 5' arm 3' arm | ||
| 3203 | - | 781 | 89 | 21.5 | -25 | NP_041227 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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