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GenBank Identifier | RefSeq Acc. | Name |
9625391 | NC_001333.1 | Enterobacteria phage fr |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
1324 | + | 494 | 88 | 21 | -25.8 | NP_039623 | 5' arm 3' arm | ||
1325 | + | 798 | 90 | 22.5 | -24.1 | NP_039623 | 5' arm 3' arm | ||
1326 | + | 1015 | 87 | 19.5 | -26.7 | NP_039623 | 5' arm 3' arm | ||
1327 | + | 2493 | 89 | 21.5 | -25.9 | NP_039626 | 5' arm 3' arm | ||
1328 | + | 3245 | 90 | 21.5 | -26.1 | NP_039626 | 5' arm 3' arm | ||
1329 | + | 3465 | 88 | 19.5 | -24.8 | 5' arm 3' arm | |||
1330 | - | 629 | 90 | 20 | -19.6 | NP_039623 | 5' arm 3' arm | ||
1331 | - | 3408 | 90 | 19.5 | -23.5 | NP_039626 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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