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GenBank Identifier | RefSeq Acc. | Name |
9635142 | NC_002250.1 | Enterobacteria phage KU1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
8709 | + | 2226 | 90 | 23 | -21.8 | NP_057950 | 5' arm 3' arm | ||
8710 | + | 2327 | 90 | 20 | -19.6 | NP_057950 | 5' arm 3' arm | ||
8711 | + | 2507 | 88 | 19 | -21.2 | NP_057950 | 5' arm 3' arm | ||
8712 | + | 3099 | 90 | 20 | -21.3 | NP_057950 | 5' arm 3' arm | ||
8713 | + | 3387 | 88 | 24.5 | -21.4 | 5' arm 3' arm | |||
8714 | - | 1114 | 89 | 24.5 | -22.5 | NP_057947 | 5' arm 3' arm | ||
8715 | - | 1677 | 88 | 23 | -22.2 | NP_057948 | 5' arm 3' arm | ||
8716 | - | 2915 | 90 | 21 | -23.4 | NP_057950 | 5' arm 3' arm | ||
8717 | - | 3384 | 90 | 20 | -23.9 | NP_057950 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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