miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
3540	+	99	88	20	-20.7	NP_042304		5' arm      3' arm
3541	+	407	90	22	-24.6	NP_042304		5' arm      3' arm
3542	+	684	87	20.5	-25	NP_042304		5' arm      3' arm
3543	+	803	86	21.5	-23.6	NP_042304		5' arm      3' arm
3544	+	988	84	23	-25.1	NP_042304		5' arm      3' arm
3545	+	1205	87	20	-24.2	NP_042304		5' arm      3' arm
3546	+	1310	90	19	-21.9	NP_042304		5' arm      3' arm
3547	+	2243	88	21	-23.7	NP_042307		5' arm      3' arm
3548	+	3030	85	21	-23.8	NP_042307		5' arm      3' arm
3549	+	3394	84	23	-20.4	NP_042307		5' arm      3' arm
3550	-	491	80	21.5	-22.5	NP_042304		5' arm      3' arm
3551	-	584	89	23	-22.5	NP_042304		5' arm      3' arm
3552	-	888	86	20	-27	NP_042304		5' arm      3' arm
3553	-	1291	87	21.5	-27.3	NP_042304		5' arm      3' arm
3554	-	1613	90	19.5	-28.2	NP_042305		5' arm      3' arm
3555	-	1783	89	20	-24.6	NP_042305		5' arm      3' arm
3556	-	2330	88	20	-23.8	NP_042307		5' arm      3' arm
3557	-	2633	88	22	-22.1	NP_042307		5' arm      3' arm
3558	-	2817	87	19	-22.8	NP_042307		5' arm      3' arm
3559	-	3113	83	21.5	-24	NP_042307		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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