miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
18314284 NC_003369.1 Bean leafroll virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12759 - 5875 90 19.5 -20.76 5' arm      3' arm
12758 - 4810 74 19 -22.9 NP_563611 5' arm      3' arm
12757 - 3424 86 19 -24.2 NP_563612 5' arm      3' arm
12756 + 1283 90 23 -20.02 NP_563609 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.