miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
30248019 NC_004756.1 Beet western yellows virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
21098 + 2557 89 20 -19.5 NP_840097 5' arm      3' arm
21099 + 4702 87 21.5 -21.1 NP_840098 5' arm      3' arm
21100 + 5329 89 20 -23.1 NP_840098 5' arm      3' arm
21101 - 2064 88 23.5 -25.4 NP_840097 5' arm      3' arm
21102 - 4198 88 21 -23.5 NP_840098 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.