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GenBank Identifier | RefSeq Acc. | Name |
30248019 | NC_004756.1 | Beet western yellows virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
21098 | + | 2557 | 89 | 20 | -19.5 | NP_840097 | 5' arm 3' arm | ||
21099 | + | 4702 | 87 | 21.5 | -21.1 | NP_840098 | 5' arm 3' arm | ||
21100 | + | 5329 | 89 | 20 | -23.1 | NP_840098 | 5' arm 3' arm | ||
21101 | - | 2064 | 88 | 23.5 | -25.4 | NP_840097 | 5' arm 3' arm | ||
21102 | - | 4198 | 88 | 21 | -23.5 | NP_840098 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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