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GenBank Identifier | RefSeq Acc. | Name |
15150434 | NC_003056.1 | Soybean dwarf virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
11255 | + | 248 | 89 | 19.5 | -20.2 | NP_150430 | 5' arm 3' arm | ||
11256 | + | 1227 | 90 | 24 | -20.2 | NP_150431 | 5' arm 3' arm | ||
11257 | + | 4649 | 84 | 24 | -30.9 | NP_150434 | 5' arm 3' arm | ||
11258 | - | 456 | 88 | 22.5 | -24.3 | NP_150430 | 5' arm 3' arm | ||
11259 | - | 3134 | 89 | 24.5 | -20.4 | NP_150433 | 5' arm 3' arm | ||
11260 | - | 3773 | 89 | 24 | -19.8 | NP_150434 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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