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GenBank Identifier | RefSeq Acc. | Name |
9629183 | NC_001777.1 | Tobacco necrosis virus A |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
5064 | + | 1997 | 90 | 26.5 | -23.3 | NP_056825 | 5' arm 3' arm | ||
5065 | + | 3194 | 90 | 19.5 | -25.7 | NP_056828 | 5' arm 3' arm | ||
5066 | - | 1183 | 89 | 20 | -22.8 | NP_056825 | 5' arm 3' arm | ||
5067 | - | 2171 | 88 | 24.5 | -28.6 | NP_056825 | 5' arm 3' arm | ||
5068 | - | 3167 | 85 | 21.5 | -22.8 | NP_056828 | 5' arm 3' arm | ||
5069 | - | 3575 | 90 | 22 | -25.7 | NP_056829 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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