miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
26553442 NC_003050.2 Streptococcus pneumoniae bacteriophage MM1 provirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11250 - 25512 90 21 -24.2 NP_150175 5' arm      3' arm
11249 - 16754 87 21 -20.8 NP_150161 5' arm      3' arm
11248 + 25424 88 20 -27.2 NP_150175 5' arm      3' arm
11247 + 23769 89 21.5 -21.7 NP_150172 5' arm      3' arm
11246 + 16668 87 22 -23.1 NP_150161 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.