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GenBank Identifier | RefSeq Acc. | Name |
9626692 | NC_001479.1 | Encephalomyocarditis virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
2577 | + | 1 | 84 | 20 | -30.8 | 5' arm 3' arm | |||
2578 | + | 355 | 89 | 19.5 | -23.3 | 5' arm 3' arm | |||
2579 | + | 1497 | 88 | 20 | -20.2 | NP_056777 | 5' arm 3' arm | ||
2580 | + | 6244 | 89 | 22 | -22.7 | NP_056777 | 5' arm 3' arm | ||
2581 | + | 6884 | 90 | 21 | -26.8 | NP_056777 | 5' arm 3' arm | ||
2582 | - | 616 | 89 | 22.5 | -31.01 | 5' arm 3' arm | |||
2583 | - | 2459 | 87 | 19 | -23.2 | NP_056777 | 5' arm 3' arm | ||
2584 | - | 3769 | 89 | 21.5 | -22.1 | NP_056777 | 5' arm 3' arm | ||
2585 | - | 6989 | 88 | 19 | -27.5 | NP_056777 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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