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GenBank Identifier | RefSeq Acc. | Name |
48429537 | NC_011451.1 | Foot-and-mouth disease virus SAT 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
33671 | + | 1460 | 83 | 19 | -25.6 | YP_022777 | 5' arm 3' arm | ||
33672 | + | 2209 | 88 | 21.5 | -22.5 | YP_022777 | 5' arm 3' arm | ||
33673 | - | 1675 | 90 | 21.5 | -23 | YP_022777 | 5' arm 3' arm | ||
33674 | - | 3660 | 89 | 22.5 | -19.4 | YP_022777 | 5' arm 3' arm | ||
33675 | - | 4761 | 87 | 22 | -25.8 | YP_022777 | 5' arm 3' arm | ||
33676 | - | 6334 | 89 | 21.5 | -23.5 | YP_022777 | 5' arm 3' arm | ||
33677 | - | 6613 | 90 | 21.5 | -19.8 | YP_022777 | 5' arm 3' arm | ||
33678 | - | 7035 | 90 | 20.5 | -21.6 | YP_022777 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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