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| GenBank Identifier | RefSeq Acc. | Name |
| 9626671 | NC_001469.1 | Cucumber necrosis virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 2554 | + | 1044 | 90 | 20 | -27.21 | NP_040953 | 5' arm 3' arm | ||
| 2555 | + | 1347 | 90 | 23 | -23.1 | NP_040953 | 5' arm 3' arm | ||
| 2556 | + | 2426 | 89 | 21 | -29.1 | NP_040953 | 5' arm 3' arm | ||
| 2557 | - | 1595 | 89 | 20.5 | -22.8 | NP_040953 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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