miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
21686950 NC_004063.1 Turnip yellow mosaic virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15644 - 872 89 20 -24.7 NP_663297 5' arm      3' arm
15645 - 2694 90 22.5 -21.7 NP_663297 5' arm      3' arm
15646 - 5664 89 26 -24.3 NP_663297 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.