miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
41057345 NC_005343.1 Poplar mosaic virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
26237 + 3590 90 21 -23.3 NP_958171 5' arm      3' arm
26238 + 8587 86 19 -20.2 NP_958176 5' arm      3' arm
26239 - 3919 88 21 -24.9 NP_958171 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.