miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
37674199 NC_005138.1 Lily symptomless virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22974 + 855 90 22 -21.36 5' arm      3' arm
22975 + 1796 81 19.5 -20.4 NP_932788 5' arm      3' arm
22976 + 4016 73 20.5 -20 NP_932788 5' arm      3' arm
22977 + 6840 90 20.5 -25.6 NP_932790 5' arm      3' arm
22978 + 8096 86 21.5 -21.7 NP_932793 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.