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| GenBank Identifier | RefSeq Acc. | Name |
| 9629178 | NC_001753.1 | Clover yellow mosaic virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 5060 | - | 3766 | 90 | 24.5 | -23.6 | NP_077079 | 5' arm 3' arm | ||
| 5061 | - | 4371 | 87 | 23.5 | -22 | NP_077079 | 5' arm 3' arm | ||
| 5062 | - | 6321 | 90 | 20 | -25 | NP_077083 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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