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GenBank Identifier | RefSeq Acc. | Name |
9629460 | NC_001812.1 | Cymbidium mosaic virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
6025 | - | 94 | 87 | 19.5 | -20.5 | 5' arm 3' arm | |||
6026 | - | 275 | 87 | 27.5 | -21.8 | NP_054025 | 5' arm 3' arm | ||
6027 | - | 1643 | 86 | 19 | -28.4 | NP_054025 | 5' arm 3' arm | ||
6028 | - | 2326 | 90 | 23 | -21.01 | NP_054025 | 5' arm 3' arm | ||
6029 | - | 5672 | 90 | 25 | -27.9 | NP_054029 | 5' arm 3' arm | ||
6030 | - | 5873 | 90 | 22 | -20.1 | 5' arm 3' arm | |||
6031 | - | 6120 | 82 | 23 | -22.6 | NP_054029 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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