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GenBank Identifier | RefSeq Acc. | Name |
70980512 | NC_007192.1 | Lily virus X |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
32617 | + | 770 | 83 | 21.5 | -23.5 | YP_263303 | 5' arm 3' arm | ||
32618 | + | 1797 | 90 | 20.5 | -21.8 | YP_263303 | 5' arm 3' arm | ||
32619 | + | 5201 | 90 | 22.5 | -22.9 | YP_263307 | 5' arm 3' arm | ||
32620 | - | 462 | 89 | 20.5 | -20.1 | YP_263303 | 5' arm 3' arm | ||
32621 | - | 1512 | 85 | 20.5 | -23.7 | YP_263303 | 5' arm 3' arm | ||
32622 | - | 2013 | 86 | 20.5 | -20.2 | YP_263303 | 5' arm 3' arm | ||
32623 | - | 2694 | 87 | 23.5 | -22.2 | YP_263303 | 5' arm 3' arm | ||
32624 | - | 4215 | 89 | 20.5 | -22.6 | YP_263304 | 5' arm 3' arm | ||
32625 | - | 5613 | 89 | 19.5 | -24.7 | YP_263307 | 5' arm 3' arm | ||
32626 | - | 5747 | 90 | 21.5 | -27.4 | YP_263307 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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