miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9635132 NC_002232.1 Rabbit oral papillomavirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8705 + 6151 88 22 -25.1 NP_057848 5' arm      3' arm
8708 - 7535 76 24.5 -27.7 5' arm      3' arm
8706 - 4989 87 23 -29.7 NP_057847 5' arm      3' arm
8707 - 7395 88 22.5 -26.9 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.