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GenBank Identifier | RefSeq Acc. | Name |
9629352 | NC_001801.1 | Cucumber green mottle mosaic virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
5527 | + | 2398 | 90 | 19.5 | -21.3 | NP_044578 | 5' arm 3' arm | ||
5528 | + | 4594 | 90 | 19.5 | -21.7 | NP_044577 | 5' arm 3' arm | ||
5529 | + | 4786 | 88 | 28 | -27.7 | NP_044577 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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