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GenBank Identifier | RefSeq Acc. | Name |
20069869 | NC_003530.1 | Carnation ringspot virus RNA 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
14727 | + | 1280 | 86 | 19 | -25.7 | NP_619711 | 5' arm 3' arm | ||
14728 | + | 1987 | 85 | 19 | -24.7 | NP_619711 | 5' arm 3' arm | ||
14729 | + | 3017 | 90 | 21 | -29.4 | NP_613255 | 5' arm 3' arm | ||
14730 | + | 3305 | 89 | 20 | -23.9 | NP_613255 | 5' arm 3' arm | ||
14731 | + | 3586 | 89 | 19 | -29.7 | NP_613256 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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